这篇文章介绍了 SpaceSequest，这是一个统一的计算管道，旨在简化和标准化来自各种平台的空间转录组学 数据分析、可视化和发布，这些平台包括10x Genomics的 Visium、Visium HD、Xenium，以及NanoString的 GeoMx和CosMx。该管道通过解决不同平台数据格式多样化带来的挑战，实现了从数据质量控制到关键分析（如 空间聚类、细胞类型解卷积和差异表达分析）的端到端处理。SpaceSequest 利用了先进的计算工具，并与 Cellxgene VIP 和 Quickomics 等可视化工具集成，使用户能够深入了解复杂的生物系统和其微环境。References: Sun, Yu H., et al. "SpaceSequest: A unified pipeline for spatial transcriptomics data analysis." bioRxiv (2025): 2025-09.
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