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Anna Greka

👤 Person
316 total appearances

Appearances Over Time

Podcast Appearances

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

Oh, thank you.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

It's a great honor to be here and glad to chat with you, Eric.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

Oh, absolutely.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

Yeah, it's an interesting story.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

In some ways, you know, in my TED talk, I highlight one of the important families of this story, a family from Utah.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

But there's also other important families that are also part of the story.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

And this is also what I spoke about in London when we were together.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

And this is really a sort of a medical mystery that initially started on the Mediterranean island of Cyprus.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

where it was found that there were many families in which in every generation, several members suffered and ultimately died from what at the time was a mysterious kidney disease.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

This was more than 30 years ago.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

And, you know, it was clear that there was something genetic going on, but it was impossible to identify the gene.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

And then even with the advent of next gen sequencing, this is what's so interesting about this story.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

It was still hard to find the gene, which is a little surprising, right?

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

You know, after we were able to sequence, you know, families and identify sort of monogenic mutations pretty readily, this was still very resistant.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

And then it actually took the firepower of the Broad Institute.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

And it's actually from a scientific perspective, an interesting story because they had to dust off the old fashioned Sanger sequencing in order to get this done.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

But they were ultimately able to identify this mutation in a VNTR region of the MUC1 gene, the Mucin-1 gene, which I call a dark corner of the human genome.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

You know, it was really, it's highly repetitive, very GC-rich, so it becomes very difficult to sequence through there with next-gen sequencing.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

And so ultimately, the mutation, of course, was found.

Ground Truths
Anna Greka: Molecular Sleuthing for Rare Diseases

And it's a single cytosine insertion in a stretch of cytosines that sort of causes this frame shift mutation and then early stop codon that essentially results in a neoprotein, like a toxic, what I call a mangled protein that sort of accumulates inside the kidney cells.

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