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Eric Topol

๐Ÿ‘ค Speaker
See mentions of this person in podcasts
3037 total appearances

Appearances Over Time

Podcast Appearances

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

We're getting into foundation models in a second.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

A good friend of mine and part of this whole, I think, process that you got together, Aaron Siegel from Israel, he said, we're at this tipping point.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

All the stars are lying and we have all the different components, the data, the compute, the modeling.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

And in the paper, you describe how we have over the last couple of decades have so many different data sets that are rich, that are global initiatives.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

But then there's also questions, do we really have the data?

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

I think Bo Wang especially asked about that.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

Maybe Charlotte, what are your thoughts about data deficiency?

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

There's a lot of data, but do you really have what we need before we

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

bring them all together for this kind of single model that will get us someday to the virtual cell.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

Speaking of data, one of the things I think that's fascinating is we saw how AlphaFold2 really revolutionized predicting proteins.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

But remember, that was based on this extraordinary resource that had been built, the protein data bank that enabled that.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

And for the virtual cell, there's no such thing as a protein data bank.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

It's so much more, as you emphasize, Charlotte, it's so much dynamic and these perturbations that are just, you know, all across the board, as you emphasize that.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

Now, the human cell atlas, which is currently some tens of millions, but going into a billion cells, we learned that it used to be 200 cell types, now I guess it's well over 5,000, and that we have 37 trillion cells approximately in the average person, adult's body.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

is a formidable map that's being made now.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

And I guess the idea that you're advancing is that we used to, and this goes back to a statement you made earlier, Steve, everything we did in science was hypothesis driven.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

But if we could get this computational model of the virtual cell, then we can have AI exploration of the whole field.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

Is that really the nuts of this?

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

Well, yeah, I mean, the premise here is that there is a language of life.

Ground Truths
Steve Quake and Charlotte Bunne: The Holy Grail of Biology

And you just made a good case that there is.